[Esip-marinedata] Fwd: Marine Life Data Workshop for July 8th at 1pm ET: edna2obis: mobilizing eDNA data to Darwin Core (Guest: Katherine Silliman, Bayden Willms)

[Mathew Biddle - NOAA Federal]

FYI, this is open to all. See the announcement below and in this GitHub
discussion
<https://github.com/ioos/marine_life_data_network/discussions/147>.

---------- Forwarded message ---------
From: Mathew Biddle - NOAA Federal <mathew.biddle at noaa.gov>
Date: Mon, Jul 7, 2025 at 10:00 AM
Subject: Marine Life Data Workshop for July 8th at 1pm ET: edna2obis:
mobilizing eDNA data to Darwin Core (Guest: Katherine Silliman, Bayden
Willms)


Hi MBON DMAC'ers!

Our next "data session" will be held on July 8th from 1pm ET - 3pm ET. The
topic will be " edna2obis: mobilizing eDNA data to Darwin Core " and will
be hosted by Katherine Silliman, Bayden Willms, and Luke Thompson. This is
a follow on to the April 8th session on FAIR-eDNA
<https://fair-edna.github.io/index.html> and BeBOP
<https://github.com/BeBOP-OBON> (notes here
<https://docs.google.com/document/d/1eaGBKaJU3TicqyXY5QLBd-qaH1cQuPGoTJi1NWU9NXs/edit?tab=t.0#heading=h.2hdqhz31vf5w>).
Below is the connection information if you would like to attend as well as
an overview of the session.

The meeting is open to others who might have an interest as well.

DNA derived data are increasingly being used to document taxon occurrences.
To ensure these data are useful to the broadest possible community, GBIF
<https://www.gbif.org/> published a guide entitled "Publishing DNA-derived
data through biodiversity data platforms.
<https://docs.gbif.org/publishing-dna-derived-data/en/>" This guide is
supported by the DNA derived data extension
<https://tools.gbif.org/dwca-validator/extension.do?id=http://rs.gbif.org/terms/1.0/DNADerivedData>
 for Darwin Core <https://dwc.tdwg.org/>, which incorporates MIxS
<https://gensc.org/mixs/> terms into the Darwin Core standard.

This use case draws on both the guide and the extension to develop a
workflow (edna2obis <https://github.com/aomlomics/edna2obis>) for
incorporating a DNA derived data extension file into a Darwin Core archive.

Connection information:
MBON DMAC working group
Tuesday, July 8 · 1:00 – 2:50pm
Time zone: America/New_York
Google Meet joining info
Video call link: https://meet.google.com/imf-qrhy-jgx
Or dial: ‪(US) +1 321-351-6755‬ PIN: ‪548 540 777‬#
More phone numbers: https://tel.meet/imf-qrhy-jgx?pin=2704290817714

Featured tools:

   - bash shell
   - python
   - pyworms
   - pandas
   - biopython
   - openpyxl


Notes:
https://docs.google.com/document/d/1eaGBKaJU3TicqyXY5QLBd-qaH1cQuPGoTJi1NWU9NXs/edit?tab=t.0#heading=h.q7rg8x9dl480

Thanks,

Matt & Laura

P.S. You can follow our workshop announcements by following the Marine Life
Data Network DataWorkshop discussions at this link
<https://github.com/ioos/marine_life_data_network/discussions/categories/dataworkshop>
.

-- 
Mathew Biddle, Physical Scientist
NOAA/NOS
US Integrated Ocean Observing System Office
1315 East-West Highway
Silver Spring MD 20910
240-533-9470

ORCiD: 0000-0003-4897-1669 <https://orcid.org/0000-0003-4897-1669>
http://www.ioos.noaa.gov/


-- 
Mathew Biddle, Physical Scientist
NOAA/NOS
US Integrated Ocean Observing System Office
1315 East-West Highway
Silver Spring MD 20910
240-533-9470

ORCiD: 0000-0003-4897-1669 <https://orcid.org/0000-0003-4897-1669>
http://www.ioos.noaa.gov/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.esipfed.org/pipermail/esip-marinedata/attachments/20250707/b536636f/attachment.htm>